"""
A wrapper around the basic kwcoco dataset with a pycocotools API.
We do not recommend using this API because it has some idiosyncrasies, where
names can be missleading and APIs are not always clear / efficient: e.g.
(1) catToImgs returns integer image ids but imgToAnns returns annotation
dictionaries.
(2) showAnns takes a dictionary list as an argument instead of an integer list
The cool thing is that this extends the kwcoco API so you can drop this for
compatibility with the old API, but you still get access to all of the kwcoco
API including dynamic addition / removal of categories / annotations / images.
"""
from kwcoco.coco_dataset import CocoDataset
import itertools as it
import ubelt as ub
import numpy as np
[docs]class COCO(CocoDataset):
"""
A wrapper around the basic kwcoco dataset with a pycocotools API.
Example:
>>> from kwcoco.compat_dataset import * # NOQA
>>> import kwcoco
>>> basic = kwcoco.CocoDataset.demo('shapes8')
>>> self = COCO(basic.dataset)
>>> self.info()
>>> print('self.imgToAnns = {!r}'.format(self.imgToAnns[1]))
>>> print('self.catToImgs = {!r}'.format(self.catToImgs))
"""
def __init__(self, annotation_file=None, **kw):
if annotation_file is not None:
if 'data' in kw:
raise ValueError('cannot specify data and annotation file')
if 'data' in kw and annotation_file is None:
annotation_file = kw.pop('data')
super().__init__(annotation_file, **kw)
[docs] def createIndex(self):
self._build_index()
[docs] def info(self):
"""
Print information about the annotation file.
:return:
"""
for key, value in self.dataset.get('info', {}).items():
print('{}: {}'.format(key, value))
@property
[docs] def imgToAnns(self):
from scriptconfig.dict_like import DictLike
class ProxyImgToAnns(DictLike):
def __init__(self, parent):
self.parent = parent
def getitem(self, gid):
aids = self.parent.index.gid_to_aids[gid]
anns = list(ub.take(self.parent.index.anns, aids))
return anns
def keys(self):
return self.parent.index.gid_to_aids.keys()
imgToAnns = ProxyImgToAnns(parent=self)
return imgToAnns
@property
[docs] def catToImgs(self):
"""
unlike the name implies, this actually goes from category to image ids
Name retained for backward compatibility
"""
catToImgs = self.index.cid_to_gids
return catToImgs
[docs] def getAnnIds(self, imgIds=[], catIds=[], areaRng=[], iscrowd=None):
"""
Get ann ids that satisfy given filter conditions. default skips that filter
:param imgIds (int array) : get anns for given imgs
catIds (int array) : get anns for given cats
areaRng (float array) : get anns for given area range (e.g. [0 inf])
iscrowd (boolean) : get anns for given crowd label (False or True)
:return: ids (int array) : integer array of ann ids
Example:
>>> from kwcoco.compat_dataset import * # NOQA
>>> import kwcoco
>>> self = COCO(kwcoco.CocoDataset.demo('shapes8').dataset)
>>> self.getAnnIds()
>>> self.getAnnIds(imgIds=1)
>>> self.getAnnIds(imgIds=[1])
>>> self.getAnnIds(catIds=[3])
"""
imgIds = imgIds if ub.iterable(imgIds) else [imgIds]
catIds = catIds if ub.iterable(catIds) else [catIds]
if len(imgIds) == len(catIds) == len(areaRng) == 0:
anns = self.dataset['annotations']
else:
if not len(imgIds) == 0:
lists = [self.imgToAnns[imgId]
for imgId in imgIds if imgId in self.imgToAnns]
anns = list(it.chain.from_iterable(lists))
else:
anns = self.dataset['annotations']
anns = anns if len(catIds) == 0 else [
ann for ann in anns if ann['category_id'] in catIds]
anns = anns if len(areaRng) == 0 else [
ann for ann in anns if ann['area'] > areaRng[0] and ann['area'] < areaRng[1]]
if iscrowd is not None:
ids = [ann['id'] for ann in anns if ann['iscrowd'] == iscrowd]
else:
ids = [ann['id'] for ann in anns]
return ids
[docs] def getCatIds(self, catNms=[], supNms=[], catIds=[]):
"""
filtering parameters. default skips that filter.
:param catNms (str array) : get cats for given cat names
:param supNms (str array) : get cats for given supercategory names
:param catIds (int array) : get cats for given cat ids
:return: ids (int array) : integer array of cat ids
Example:
>>> from kwcoco.compat_dataset import * # NOQA
>>> import kwcoco
>>> self = COCO(kwcoco.CocoDataset.demo('shapes8').dataset)
>>> self.getCatIds()
>>> self.getCatIds(catNms=['superstar'])
>>> self.getCatIds(supNms=['raster'])
>>> self.getCatIds(catIds=[3])
"""
catNms = catNms if ub.iterable(catNms) else [catNms]
supNms = supNms if ub.iterable(supNms) else [supNms]
catIds = catIds if ub.iterable(catIds) else [catIds]
cats = self.dataset['categories']
if catNms or supNms or catIds:
cats = self.dataset['categories']
if catNms:
cats = [cat for cat in cats if cat['name'] in catNms]
if supNms:
cats = [
cat for cat in cats if cat.get(
'supercategory',
None) in supNms]
if catIds:
cats = [cat for cat in cats if cat['id'] in catIds]
ids = [cat['id'] for cat in cats]
return ids
[docs] def getImgIds(self, imgIds=[], catIds=[]):
'''
Get img ids that satisfy given filter conditions.
:param imgIds (int array) : get imgs for given ids
:param catIds (int array) : get imgs with all given cats
:return: ids (int array) : integer array of img ids
Example:
>>> from kwcoco.compat_dataset import * # NOQA
>>> import kwcoco
>>> self = COCO(kwcoco.CocoDataset.demo('shapes8').dataset)
>>> self.getImgIds(imgIds=[1, 2])
>>> self.getImgIds(catIds=[3, 6, 7])
>>> self.getImgIds(catIds=[3, 6, 7], imgIds=[1, 2])
'''
imgIds = imgIds if ub.iterable(imgIds) else [imgIds]
catIds = catIds if ub.iterable(catIds) else [catIds]
if not imgIds:
valid_gids = set(self.imgs.keys())
else:
valid_gids = set(imgIds)
if catIds:
hascat_gids = set()
for aids in ub.take(self.index.cid_to_aids, catIds):
hascat_gids |= set(self.annots(aids).lookup('image_id'))
valid_gids &= hascat_gids
return sorted(valid_gids)
[docs] def loadAnns(self, ids=[]):
"""
Load anns with the specified ids.
:param ids (int array) : integer ids specifying anns
:return: anns (object array) : loaded ann objects
"""
if isinstance(ids, int):
return self.anns[ids]
return list(ub.take(self.anns, ids))
[docs] def loadCats(self, ids=[]):
"""
Load cats with the specified ids.
:param ids (int array) : integer ids specifying cats
:return: cats (object array) : loaded cat objects
"""
if isinstance(ids, int):
return self.cats[ids]
return list(ub.take(self.cats, ids))
[docs] def loadImgs(self, ids=[]):
"""
Load anns with the specified ids.
:param ids (int array) : integer ids specifying img
:return: imgs (object array) : loaded img objects
"""
if isinstance(ids, int):
return self.imgs[ids]
return list(map(self.load_image, ids))
[docs] def showAnns(self, anns, draw_bbox=False):
"""
Display the specified annotations.
:param anns (array of object): annotations to display
:return: None
"""
aids = [ann['id'] for ann in anns]
self.show_image(aids=aids, show_boxes=draw_bbox)
# raise NotImplementedError
[docs] def loadRes(self, resFile):
"""
Load result file and return a result api object.
:param resFile (str) : file name of result file
:return: res (obj) : result api object
"""
import json
import time
import copy
res = COCO()
res.dataset['images'] = [img for img in self.dataset['images']]
print('Loading and preparing results...')
tic = time.time()
if isinstance(resFile, str):
anns = json.load(open(resFile))
elif isinstance(resFile, np.ndarray):
anns = self.loadNumpyAnnotations(resFile)
else:
anns = resFile
assert isinstance(anns, list), 'results in not an array of objects'
annsImgIds = [ann['image_id'] for ann in anns]
assert set(annsImgIds) == (set(annsImgIds) & set(self.getImgIds())), \
'Results do not correspond to current coco set'
if len(anns):
if 'caption' in anns[0]:
imgIds = set([img['id'] for img in res.dataset['images']]) & set(
[ann['image_id'] for ann in anns])
res.dataset['images'] = [
img for img in res.dataset['images'] if img['id'] in imgIds]
for id, ann in enumerate(anns):
ann['id'] = id + 1
elif 'bbox' in anns[0] and not anns[0]['bbox'] == []:
res.dataset['categories'] = copy.deepcopy(
self.dataset['categories'])
for id, ann in enumerate(anns):
bb = ann['bbox']
x1, x2, y1, y2 = [bb[0], bb[0] + bb[2], bb[1], bb[1] + bb[3]]
if 'segmentation' not in ann:
ann['segmentation'] = [[x1, y1, x1, y2, x2, y2, x2, y1]]
ann['area'] = bb[2] * bb[3]
ann['id'] = id + 1
ann['iscrowd'] = 0
elif 'segmentation' in anns[0]:
res.dataset['categories'] = copy.deepcopy(
self.dataset['categories'])
for id, ann in enumerate(anns):
# now only support compressed RLE format as segmentation
# results
raise NotImplementedError('havent ported mask results yet')
# ann['area'] = maskUtils.area(ann['segmentation'])
# if 'bbox' not in ann:
# ann['bbox'] = maskUtils.toBbox(ann['segmentation'])
ann['id'] = id + 1
ann['iscrowd'] = 0
elif 'keypoints' in anns[0]:
res.dataset['categories'] = copy.deepcopy(
self.dataset['categories'])
for id, ann in enumerate(anns):
s = ann['keypoints']
x = s[0::3]
y = s[1::3]
x0, x1, y0, y1 = np.min(x), np.max(x), np.min(y), np.max(y)
ann['area'] = (x1 - x0) * (y1 - y0)
ann['id'] = id + 1
ann['bbox'] = [x0, y0, x1 - x0, y1 - y0]
print('DONE (t={:0.2f}s)'.format(time.time() - tic))
res.dataset['annotations'] = anns
res.createIndex()
return res
[docs] def download(self, tarDir=None, imgIds=[]):
'''
Download COCO images from mscoco.org server.
:param tarDir (str): COCO results directory name
imgIds (list): images to be downloaded
:return:
'''
if tarDir is not None:
self.reroot(tarDir)
if not imgIds:
imgIds = None
self._ensure_image_data(gids=imgIds)
[docs] def loadNumpyAnnotations(self, data):
"""
Convert result data from a numpy array [Nx7] where each row contains {imageID,x1,y1,w,h,score,class}
:param data (numpy.ndarray)
:return: annotations (python nested list)
"""
print('Converting ndarray to lists...')
assert isinstance(data, np.ndarray)
assert data.shape[1] == 7
N = data.shape[0]
ann = []
for i in ub.ProgIter(range(N)):
ann += [{
'image_id': int(data[i, 0]),
'bbox': [data[i, 1], data[i, 2], data[i, 3], data[i, 4]],
'score': data[i, 5],
'category_id': int(data[i, 6]),
}]
return ann
[docs] def annToRLE(self, ann):
"""
Convert annotation which can be polygons, uncompressed RLE to RLE.
:return: binary mask (numpy 2D array)
Note:
* This requires the C-extensions for kwimage to be installed
due to the need to interface with the bytes RLE format.
Example:
>>> from kwcoco.compat_dataset import * # NOQA
>>> import kwcoco
>>> self = COCO(kwcoco.CocoDataset.demo('shapes8').dataset)
>>> try:
>>> rle = self.annToRLE(self.anns[1])
>>> except NotImplementedError:
>>> import pytest
>>> pytest.skip('missing kwimage c-extensions')
>>> else:
>>> assert len(rle['counts']) > 2
>>> # xdoctest: +REQUIRES(module:pycocotools)
>>> self.conform(legacy=True)
>>> orig = self._aspycoco().annToRLE(self.anns[1])
"""
from kwimage.structs.segmentation import _coerce_coco_segmentation
aid = ann['id']
ann = self.anns[aid]
t = self.imgs[ann['image_id']]
h, w = t['height'], t['width']
data = ann['segmentation']
dims = (h, w)
sseg = _coerce_coco_segmentation(data, dims)
try:
rle = sseg.to_mask(dims=dims).to_bytes_rle().data
except NotImplementedError:
raise NotImplementedError((
'kwimage does not seem to have required '
'c-extensions for bytes RLE'))
return rle
[docs] def annToMask(self, ann):
"""
Convert annotation which can be polygons, uncompressed RLE, or RLE to
binary mask.
:return: binary mask (numpy 2D array)
Note:
The mask is returned as a fortran (F-style) array with the same
dimensions as the parent image.
Ignore:
>>> from kwcoco.compat_dataset import * # NOQA
>>> import kwcoco
>>> self = COCO(kwcoco.CocoDataset.demo('shapes8').dataset)
>>> mask = self.annToMask(self.anns[1])
>>> # xdoctest: +REQUIRES(module:pycocotools)
>>> self.conform(legacy=True)
>>> orig = self._aspycoco().annToMask(self.anns[1])
>>> # xdoctest: +REQUIRES(--show)
>>> import kwplot
>>> kwplot.autompl()
>>> diff = kwimage.normalize((compat_mask - orig_mask).astype(np.float32))
>>> kwplot.imshow(diff)
>>> kwplot.show_if_requested()
"""
from kwimage.structs.segmentation import _coerce_coco_segmentation
aid = ann['id']
ann = self.anns[aid]
data = ann['segmentation']
dims = None
sseg = _coerce_coco_segmentation(data, dims)
try:
mask = sseg.to_mask()
except Exception:
img = self.imgs[ann['image_id']]
dims = (img['height'], img['width'])
mask = sseg.to_mask(dims=dims)
m = mask.to_fortran_mask().data
return m